Nanopore provides cheap access to long reads that easily solve problems that looked impossible 5 years ago. Nanopore is still considered subpar to Pacbio as a service, but has many important advantages (direct RNA, extra-long reads, etc).
Tools for Nanopore reads are changing every month, so that analysis requires lots of bioinformatic knowledge.
We analyze reads that performed by Promethion, Gridion, Minion and Smidgion. Data is provided in fast5, FASTQ or FASTA format.